prokbert.sequtils.pretty_print_overlapping_sequence

prokbert.sequtils.pretty_print_overlapping_sequence(segment, segment_kmers, tokenizer_params)

Format the sequence for pretty printing with overlapping k-mers.

Parameters

segment (str) – DNA sequence.
segment_kmers (list) – List of k-mers in the segment.
tokenizer_params (dict) – Dictionary containing tokenization parameters.

Returns

List of formatted strings representing the sequence with overlapping k-mers.

Return type